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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Mike Piazza | 15th | Tied for 24th | 25th | |
| First Basemen | Jermaine Dye | 11th | Michael Aubrey | 1st | 5th |
| Second Basemen | Chris Woodward | 28th | Jose Castillo | Tied for 9th | 15th |
| Third Basemen | Edgardo Alfonzo | 15th | Ian Stewart | Tied for 8th | 10th |
| Shortstops | Jhonny Peralta | Tied for 12th | Brendan Ryan | 6th | 4th |
| Left Fielders | Shawn Green | 1st | Ivan Terrazas | 4th | 1st |
| Center Fielders | Vernon Wells | 10th | Felix Pie | Tied for 8th | 3rd |
| Right Fielders | Jonny Gomes | 7th | Cristhian Presichi | 15th | 15th |
| Starting Pitchers | David Weathers | 8th | John Maine | 27th | 24th |
| Relievers | Chris Reitsma | 24th | Ryan Webb | 21st | 24th |
| Closers | Akinori Otsuka | 3rd | Sean Green | Tied for 14th | 3rd |
