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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Yadier Molina | 8th | John Baker | 6th | 5th |
| First Basemen | Lyle Overbay | 24th | Micah Hoffpauir | 8th | 14th |
| Second Basemen | Luis Rivas | 22nd | Kevin Melillo | 25th | 26th |
| Third Basemen | Robin Ventura | 6th | Jeff Baker | 6th | 2nd |
| Shortstops | Jose Vidro | 12th | Don Kelly | Tied for 8th | 6th |
| Left Fielders | Austin Kearns | 7th | Matt Murton | 14th | 14th |
| Center Fielders | Mike Cameron | 14th | Tony Gwynn Jr. | 7th | 8th |
| Right Fielders | Curtis Granderson | 11th | Delmon Young | 6th | 6th |
| Starting Pitchers | Freddy Garcia | 1st | Jason Vargas | 12th | 4th |
| Relievers | Dustin McGowan | 28th | Esteban Hernandez | 26th | 29th |
| Closers | Felix Rodriguez | 8th | Edwin Jackson | 3rd | 5th |
