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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Victor Martinez | 6th | Robinson Chirinos | 9th | 4th |
| First Basemen | Carlos Delgado | 8th | Ryan Garko | 12th | 4th |
| Second Basemen | Cristian Guzman | 9th | Robinson Cano | Tied for 12th | 8th |
| Third Basemen | Morgan Ensberg | 15th | Mark Reynolds | 18th | 18th |
| Shortstops | Mark Grudzielanek | 25th | Hector Luna | 7th | 12th |
| Left Fielders | Amaury Garcia | 29th | Tied for 22nd | 29th | |
| Center Fielders | Magglio Ordonez | 8th | Wayne Lydon | 20th | 16th |
| Right Fielders | Alex Rios | 5th | 25th | 24th | |
| Starting Pitchers | Adam Wainwright | 18th | Matt Cain | 4th | 7th |
| Relievers | Billy Koch | 26th | Brandon Kintzler | 20th | 24th |
| Closers | Robb Nen | 16th | Jason Motte | 25th | 25th |
